γδ T Cells in Epithelial Surveillance and Inflammation: Insights from Organoid Models and Multimodal Analysis

Introduction

γδ T cells are a unique subset of T lymphocytes characterized by their expression of a gamma-delta (γδ) T-cell receptor (TCR), in contrast to the conventional alpha-beta (αβ) TCR found on most T cells. Unlike αβ T cells, which are central to adaptive immunity and rely on antigen presentation by MHC molecules, γδ T cells exhibit innate-like properties, responding rapidly to stress signals and microbial patterns without requiring classical antigen presentation.

A particularly important aspect of γδ T cell biology is their close interaction with epithelial cells at barrier sites, such as the skin, gastrointestinal tract, respiratory epithelium, and urogenital tract. These cells play a crucial role in epithelial homeostasis, tissue repair, and the regulation of inflammation. Recent advances in organoid technology have provided a physiologically relevant platform to investigate the behavior and function of γδ T cells in controlled three-dimensional (3D) epithelial environments.

In this article, we explore how γδ T cells interact with epithelial cells under both homeostatic and inflammatory conditions, and how this is being studied using organoid co-cultures and advanced analytical methods such as transcriptomics, spectral flow cytometry, and imaging.


γδ T Cells vs. αβ T Cells: Functional and Structural Comparison

To understand the unique role of γδ T cells at epithelial surfaces, it is useful to compare their characteristics with those of αβ T cells.

 

γδ T Cell–Epithelial Cell Interaction

γδ T cells reside within or just beneath epithelial layers. Their activation is often mediated by stress-induced ligands expressed by epithelial cells in response to damage, infection, or transformation. These ligands include MHC class I-like molecules such as MIC-A/B (in humans) and Rae-1 (in mice), as well as butyrophilin family members.

Activated γδ T cells produce cytokines like IL-17 and IFN-γ, mediate cytotoxicity, and secrete growth factors that contribute to tissue repair and regeneration.

Diagram 1: γδ T Cells in Epithelial Tissues (Text-Based)

 

Modeling Inflammation in Organoids

Organoids are 3D culture systems derived from stem cells or primary tissues that recapitulate the architecture and function of real organs. Epithelial organoids derived from the intestine, lung, or skin offer an ideal model for studying γδ T cell interactions with epithelial cells under homeostatic and inflammatory conditions.

By introducing pro-inflammatory cytokines (e.g., IL-1β, TNF-α) or microbial components (e.g., LPS, flagellin) into the culture, inflammation can be induced within the organoid. Co-culture of γδ T cells with epithelial organoids allows researchers to observe:

  • Activation and recruitment of γδ T cells

  • Modulation of epithelial gene expression

  • Tissue repair responses

  • Cytokine production dynamics

  • Cell-cell interaction via ligand-receptor engagement


Analytical Techniques

To dissect the molecular and cellular mechanisms involved in γδ T cell–epithelial interactions during inflammation, several advanced analytical approaches are employed.

1. Transcriptomics

Bulk RNA-seq or single-cell RNA sequencing (scRNA-seq) can reveal changes in gene expression profiles in both γδ T cells and epithelial cells. Key readouts include:

  • Upregulation of stress ligands in epithelial cells

  • Induction of cytokine genes in γδ T cells (e.g., IL17A, IFNG)

  • Pathway enrichment (e.g., NF-κB signaling, epithelial repair mechanisms)

This enables the identification of molecular programs driving immune-epithelial cross-talk during inflammation.

2. Spectral Flow Cytometry

Spectral flow cytometry allows high-dimensional phenotyping of γδ T cells within the co-culture system. It can distinguish between activation states, cytokine production profiles, and expression of surface receptors.

Markers commonly used include:

  • TCRγδ, CD3

  • Activation: CD69, CD25

  • Cytokines: IL-17, IFN-γ

  • Homing and tissue residency: CD103, CD49a

This approach provides quantitative data on cell subsets and their functional states.

3. Imaging and Spatial Analysis

Advanced microscopy techniques such as confocal microscopy, live-cell imaging, and 3D immunofluorescence enable visualization of physical interactions between γδ T cells and epithelial cells in organoids.

Key applications:

  • Monitoring γδ T cell infiltration into organoids

  • Visualizing epithelial damage and repair

  • Spatial colocalization of ligand-receptor pairs (e.g., MIC-A and NKG2D)


Conclusions and Future Directions

γδ T cells are essential players in the maintenance of epithelial integrity and in the regulation of inflammation at barrier surfaces. Organoid-based models provide a powerful platform to study these interactions in a context that closely resembles in vivo tissues. The integration of transcriptomics, spectral flow cytometry, and advanced imaging offers a comprehensive view of immune-epithelial dynamics during inflammation.

Future work will likely focus on:

  • Human organoid co-culture systems using patient-derived cells

  • Modeling chronic inflammatory diseases (e.g., IBD, psoriasis) with organoids and immune cells

  • Drug screening to modulate γδ T cell activity for therapeutic benefit

The ability to model and analyze γδ T cell–epithelial interactions in vitro opens new avenues for understanding barrier immunity and developing precision immunotherapies.

 

© 2000-2025 Sieglinde W. Alexander. All writings by Sieglinde W. Alexander have a fife year copy right. Library of Congress Card Number: LCN 00-192742

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